Pneumonia due to Streptococcus pneumoniae

J10_PNEUMOPNEUMO

streptococcal pneumonia: A febrile disease caused by streptococcus pneumoniae.

Endpoint definition

FinnGen phenotype data

429209 individuals

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Apply sex-specific rule None

429209

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Check conditions None

429209

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Check pre-conditions, main-only, mode, registry filters

Hospital Discharge: ICD-10 J13
Hospital discharge: ICD-9 481
Hospital discharge: ICD-8 48199
Cause of death: ICD-10 J13
Cause of death: ICD-9 481
Cause of death: ICD-8 48199

2 out of 7 registries used, show all original rules.

1396

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Check minimum number of events None

1396

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Include endpoints None

1396

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Remove individuals based on genotype QC

1339

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J10_PNEUMOPNEUMO

Control definitions

Control exclude J10_INFLUPNEU

Extra metadata

Level in the ICD hierarchy 4
First used in FinnGen datafreeze DF2
Parent code in ICD-10 J09-J18
Name in latin Pneumonia a Streptococco pneumoniae

Summary Statistics

Key figures

All Female Male
Number of individuals 1339 543 796
Unadjusted prevalence (%) 0.33 0.24 0.44
Mean age at first event (years) 49.19 46.52 51.01

Mortality

Follow-up Absolute risk HR [95% CI] p N
1998–2019 0.14 7.00 [4.80, 10.21] 4.3e-24 329
15 years 0.02 3.07 [2.21, 4.25] 1.5e-11 109
5 years 0.01 6.45 [4.83, 8.61] 9.7e-37 104
1 year - - - -

Age distribution of first events

Year distribution of first events

Cumulative Incidence

Correlations

Index endpoint: J10_PNEUMOPNEUMO – Pneumonia due to Streptococcus pneumoniae
GWS hits:

Survival analyses between endpoints

Plot

before Pneumonia due to Streptococcus pneumoniae
after Pneumonia due to Streptococcus pneumoniae

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Drugs most likely to be purchased after Pneumonia due to Streptococcus pneumoniae

Endpoint not on priority list, no data to show.