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Bacterial pneumoniae

DOID EFO MESH SNOMED Endpoint Browser PheWeb

J10_PNEUMOBACT

bacterial pneumonia: Inflammation of the lung parenchyma that is caused by bacterial infections.

Endpoint definition

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FinnGen phenotype data

429209 individuals

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Apply sex-specific rule None

429209

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Check conditions None

429209

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Check pre-conditions, main-only, mode, registry filters None

0 out of 7 registries used, show all original rules.

0

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Check minimum number of events None

0

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Include endpoints

18158

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Remove individuals based on genotype QC

17511

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J10_PNEUMOBACT

Control definitions

Control exclude J10_INFLUPNEU

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2

No data for upset plot.

No data for upset table.

Similar endpoints

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List of similar endpoints to Bacterial pneumoniae based on the number of shared cases.

Venn diagram with an highlighted set fully inside another set Broader endpoints:

Venn diagram with a set fully inside an highlighted set Narrower endpoints:

Show all endpoint correlations

Summary Statistics

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Key figures

All Female Male
Number of individuals 17511 7059 10452
Unadjusted prevalence (%) 4.25 3.07 5.75
Mean age at first event (years) 58.12 52.07 62.20

Mortality

Follow-up Absolute risk HR [95% CI] p N
1998–2019 0.14 6.81 [5.88, 7.87] <1e-100 6455
15 years 0.02 2.57 [2.30, 2.88] 7.5e-63 1665
5 years 0.01 5.96 [5.45, 6.52] <1e-100 1844
1 year 0.01 30.89 [28.04, 34.03] <1e-100 2589

Age distribution of first events

Year distribution of first events

Cumulative Incidence

Correlations

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Index endpoint: J10_PNEUMOBACT – Bacterial pneumoniae
GWS hits: 3

Survival analyses between endpoints

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Plot

before Bacterial pneumoniae
after Bacterial pneumoniae

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Drugs most likely to be purchased after Bacterial pneumoniae

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Endpoint not on priority list, no data to show.