Endpoint definition
↥
FinnGen phenotype data
individuals
Apply sex-specific rule
Sex
only females
Check conditions
not C3_BREAST
Check pre-conditions, main-only, mode, registry filters
Hospital Discharge: ICD-10
D05
Cause of death: ICD-10
D05
Cancer registry: Topography ICD-O-3
C50
Cancer registry: Morphology ICD-O-3
ANY
Cancer registry: Behaviour codes
2
3 out of 7 registries used, show all original rules.
-
Check minimum number of events None
-
Remove individuals based on genotype QC
241
CD2_INSITU_BREAST_EXALLC
Control definitions
Control exclude
C3_CANCER, C3_CANCER_WIDE
Extra metadata
Level in the ICD hierarchy
2
First used in FinnGen datafreeze
DF9
Parent code in ICD-10
D00-D09
Name in latin
Carcinoma in situ vulvae
No upset plot: script not run.
No upset table: script not run.
Carcinoma in situ of breast (controls excluding all cancers)
based on the number of shared cases.
Broader endpoints:
Narrower endpoints:
Loading survival analyses plot