Endpoint definition
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FinnGen phenotype data
individuals
Apply sex-specific rule None
Check conditions None
Check pre-conditions, main-only, mode, registry filters
Cause of death: ICD-10
C92.1
Cause of death: ICD-9
2051A
Cause of death: ICD-8
20515
Cancer registry: Topography ICD-O-3
ANY
Cancer registry: Morphology ICD-O-3
9863|9875
Cancer registry: Behaviour codes
3
2 out of 7 registries used, show all original rules.
-
Check minimum number of events None
-
Include endpoints None
-
Remove individuals based on genotype QC
115
C3_CML_EXALLC
Control definitions
Control exclude
C3_CANCER, C3_CANCER_WIDE
Extra metadata
Level in the ICD hierarchy
C
First used in FinnGen datafreeze
DF8
No upset plot: script not run.
No upset table: script not run.
Chronic myeloid leukaemia (controls excluding all cancers)
based on the number of shared cases.
Broader endpoints:
Narrower endpoints:
Loading survival analyses plot