Other salmonella infections

Endpoint Browser PheWeb

AB1_SALMONELLA_OTH

No definition available.

Endpoint definition

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FinnGen phenotype data

429209 individuals

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Apply sex-specific rule None

429209

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Check conditions None

429209

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Check pre-conditions, main-only, mode, registry filters

Hospital Discharge: ICD-10 A02

Hospital discharge: ICD-9 003.

Hospital discharge: ICD-8 00[3]

Cause of death: ICD-10 A02

Cause of death: ICD-9 003.

Cause of death: ICD-8 00[3]

2 out of 7 registries used, show all original rules.

1188

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Check minimum number of events None

1188

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Include endpoints None

1188

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Remove individuals based on genotype QC

1151

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AB1_SALMONELLA_OTH

Control definitions

Control exclude AB1_INTESTINAL_INFECTIONS

Extra metadata

Level in the ICD hierarchy 3

First used in FinnGen datafreeze DF5

NAME	AB1_SALMONELLA_OTH
CONTROL_EXCLUDE	AB1_INTESTINAL_INFECTIONS
CONTROL_PRECONDITIONS
CONTROL_CONDITIONS
SEX
INCLUDE
PRE_CONDITIONS
CONDITIONS
OUTPAT_ICD
OUTPAT_OPER
HD_MAINONLY
HD_ICD_10_ATC
HD_ICD_10	A02
HD_ICD_9	003.
HD_ICD_8	00[3]
HD_ICD_10_EXCL
HD_ICD_9_EXCL
HD_ICD_8_EXCL
COD_MAINONLY
COD_ICD_10	A02
COD_ICD_9	003.
COD_ICD_8	00[3]
COD_ICD_10_EXCL
COD_ICD_9_EXCL
COD_ICD_8_EXCL
OPER_NOM
OPER_HL
OPER_HP1
OPER_HP2
KELA_REIMB
KELA_REIMB_ICD
KELA_ATC_NEEDOTHER
KELA_ATC
KELA_VNRO_NEEDOTHER
KELA_VNRO
CANC_TOPO
CANC_TOPO_EXCL
CANC_MORPH
CANC_MORPH_EXCL
CANC_BEHAV

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Or the full data table

Similar endpoints

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List of similar endpoints to Other salmonella infections based on the number of shared cases.

Broader endpoints:

Narrower endpoints:

None

Show all endpoint correlations

Summary Statistics

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Key figures

	All	Female	Male
Number of individuals	1151	648	503
Unadjusted prevalence (%)	0.28	0.28	0.28
Mean age at first event (years)	37.97	35.05	41.73

Mortality

Follow-up	Absolute risk	HR [95% CI]	p	N
1998–2019	0.02	1.17 [0.67, 2.07]	5.8e-1	150
15 years	0.01	1.00 [0.65, 1.55]	1.0e+0	66
5 years	0.00	1.02 [0.58, 1.77]	9.6e-1	18
1 year	-	-	-	-

Age distribution of first events

Year distribution of first events

Cumulative Incidence

Correlations

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Index endpoint: AB1_SALMONELLA_OTH – Other salmonella infections
GWS hits:

Survival analyses between endpoints

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Plot

before Other salmonella infections
after Other salmonella infections

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Table

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Drugs most likely to be purchased after Other salmonella infections

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Endpoint not on priority list, no data to show.